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Genetic resistances to plant viruses and their vectors

Bibliographic Reference from
FUSAGx Plant Pathology Unit - FUSAGx
Gembloux - Belgium

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Last database update for these data: 2006-11-09 - Data extracted on 2009-04-14 from the database.

Detection of apple chlorotic leaf spot virus using a 5' nuclease assay with a fluorescent 3' minor groove binder-DNA probe

Bibliographic Reference
Field Value
Document typeJournal article: paper
LanguageEnglish
Year2002
AuthorsSalmon, M. A.
Vendrame, M.
Kummert, J.
Lepoivre, P.
TitleDetection of apple chlorotic leaf spot virus using a 5' nuclease assay with a fluorescent 3' minor groove binder-DNA probe
SourceJ. Virol. Methods
Volume104
Issue1
Pages99-106
AbstractThe development of a real-time 5' nuclease RT-PCR assay for the detection of apple chlorotic leaf spot virus (ACLSV) from infected plant material is described. A short fluorogenic 3' minor groove binder-DNA hydrolysis probe was used to circumvent genome variability between isolates and target a short conserved sequence. The covalent attachment of the minor groove binder moiety at the 3' end of the probe increased the probe/target duplex stability and raised the melting temperature to a range suitable for real-time analysis. The method is rapid, sensitive and takes place within a single tube without post-PCR handling of the amplification products.
ISSN0166-0934
DescriptorsApple chlorotic leaf spot virus
5 ' nuclease assay
Minor groove binder
RT-PCR
VirusesApple chlorotic leaf spot virus